MEME Suite

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The MEME Suite allows you to:

  • discover motifs using MEME or GLAM2 on groups of related DNA or protein sequences,
  • search sequence databases using motifs,
  • compare a motif to all motifs in a database of motifs, and
  • associate motifs with Gene Ontology terms via their putative target genes.

[edit] Availability

  • phylogeny.ist.unomaha.edu (4.1.0)

[edit] Installation procedure

instructions 

wget http://meme.nbcr.net/downloads/meme_4.1.0.tar.gz
tar xvzf meme_4.1.0.tar.gz 
cd meme_4.1.0
./configure --prefix=/usr/local/meme
make
make test
make install

[edit] Links

Retrieved from "http://clab.ist.unomaha.edu/CLAB/index.php/MEME_Suite"